miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|90220611|gb|BX269564.4|BX269564 GTGAGCCGGGTCCTGTGTAGCTCTCCAGCCCCCAGGTACCTGGGGCGCCCGAGGGCTGAGCAGACAGTGCTGGTGAGACC
CCCCTTCCTGCGGCCCGAGGTGTCAGATGGCCAAATCACTGTCAAGATCATGGACAACGGTATCCAGACAGAGCTGAAGA
GGACGAAGTCCAAAGGAAGCCTGGAGGTGACGGAGAGCCAGTCTGCTGATGCCGAACCGCCACCCCCACCTAAGCCAGAC
CTCAGCCGCTACACGGGCCTGAGGACACACTTAACCCTGGCCACCAATGAGGACAGCAGCTTGCTAGGCAAGGACAGCCC
CCCGACACCCACCATGTACAAGTACCGGCCTGGATACAGCAGCAGCAGCAGCTCAGCTGCCCTGCCCCATTCCACCAGCG
CCAAGCTGAGCCGTGTGTTCAGCCTGAAGGAGCCCAACTCCATCGGGAGGGCGGCCGCAGCTATTCCCATTAGTGAGAGT
ATATAGCATGCACTGG




Most similar to sp|Q8VDZ4|ZDHC5_MOUSE

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q8VDZ4|ZDHC5_MOUSE Probable palmitoyltransferase ZDHHC5 OS=Mus
           musculus GN=Zdhhc5 PE=1 SV=1
          Length = 715

 Score =  222 bits (565), Expect = 1e-57
 Identities = 113/148 (76%), Positives = 121/148 (81%)
 Frame = +1

Query: 1   VSRVLCSSPAPRYLGRPRAEQTVLVRPPFLRPEVSDGQITVKIMDNGIQTELKRTKSKGS 180
           VSRVLCSSPAPRYLGRP+ E+T+++RPPFLRPEVSDGQITVKIMDNGIQ EL+RTKSKGS
Sbjct: 240 VSRVLCSSPAPRYLGRPKKEKTIVIRPPFLRPEVSDGQITVKIMDNGIQGELRRTKSKGS 299

Query: 181 LEVTESQSADAEXXXXXXXDLSRYTGLRTHLTLATNEDSSLLGKDSPPTPTMYKYRPGYX 360
           LE+TESQSADAE       DLSRYTGLRTHL+LATNEDSSLLGKDSPPTPTMYKYRPGY 
Sbjct: 300 LEITESQSADAEPPPPPKPDLSRYTGLRTHLSLATNEDSSLLGKDSPPTPTMYKYRPGYS 359

Query: 361 XXXXXXXXXXXXXXKLSRVFSLKEPNSI 444
                         KLSR  SLKEP SI
Sbjct: 360 SSSTSAAMPHSSSAKLSRGDSLKEPTSI 387